As a command-line interface
Convert-Pheno
software includes a command-line utility, which is particularly useful when working with text files, such as those exported from PostgreSQL, as input.
Usage¶
The operation is simple:
$ convert-pheno -input-format <filein> -output-format <fileout>
Google Colab tutorial
We created a Google Colab tutorial notebook to enable testing Convert-Pheno
in a virtual environment. Users can view notebooks shared publicly without sign-in, but you need a google account to execute code.
Please see more examples in this README.
Inspiration
The command line operation was inspired by convert
tool from ImageMagick and from OpenBabel.